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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49947479_49947873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49947479 - 49947873

Intron Length:

395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

GTGTATGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCATTGTAAACT

Flanking Amino Acid:

SGGIMLVMDQVLRCSKITAV

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

87.6

0.93

0.9

89.3

Major PPT

64.3

0.32

1.1

58.2

46.1

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

2.3

71.66

45.5

Associated Gene:

Gene:

EXOSC9

Ensembl Gene ID:

ENSAPLG00000004920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005116

49945172 - 49949695

4524