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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49954292_49955269_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49954292 - 49955269

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

TTCCCTTCAGAA

Flanking Amino Acid:

TNAKVESLSMYLGELTLIDA

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

82.6

29.6

Major BPS

64.9

0.37

37.5

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

37.2

-1.4

46.4

Minor BPS

46.2

-0.2

1.8

58.41

41.1

Associated Gene:

Gene:

CCNA2

Ensembl Gene ID:

ENSAPLG00000005183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005362

49953044 - 49957349

4306