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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49974918_49975484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49974918 - 49975484

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TTCTTTTTTATA

Flanking Amino Acid:

CFGMKKGEPVPVFKTLPGQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

90.6

0.91

0.6

87.5

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

59.5

0.29

1.6

69.68

37.1

Associated Gene:

Gene:

BBS7

Ensembl Gene ID:

ENSAPLG00000005255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005472

49957492 - 49975827

18336