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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49978373_49979493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49978373 - 49979493

Intron Length:

1121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTGTGCTTAACC

Flanking Amino Acid:

SILNQPTRYQQIMKRLIKRY

Intron Amino Acid Position:

861

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.8

22.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.9

0.54

69.9

Minor 5ss

-1.6

2.6

43.5

43.6

Minor BPS

68.3

0.56

1.8

75.04

41.5

Associated Gene:

Gene:

TRPC3

Ensembl Gene ID:

ENSAPLG00000005541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022084

49977295 - 50016835

39541

ENSAPLT00000005749

49976691 - 50016835

40145