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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49981943_49983741_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49981943 - 49983741

Intron Length:

1799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGATC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCCTCCTTAATA

Flanking Amino Acid:

MINSSYQEIEDDSDVEWKFA

Intron Amino Acid Position:

763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

35.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.6

0.55

0.9

69.1

34.8

Minor 5ss

35.4

-1.7

3.5

50.7

46.2

Minor BPS

80.2

0.94

1.1

78.78

38.5

Associated Gene:

Gene:

TRPC3

Ensembl Gene ID:

ENSAPLG00000005541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022084

49977295 - 50016835

39541

ENSAPLT00000005749

49976691 - 50016835

40145