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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49985820_49987307_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49985820 - 49987307

Intron Length:

1488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTATCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTGTATTTACCT

Flanking Amino Acid:

LPPEIEYFTYARDKWLPSDP

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

81.9

26.2

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

82.4

0.73

0.9

73.8

41.4

Minor 5ss

38.5

-1.3

2.9

45.9

43.7

Minor BPS

61.3

0.43

1.8

80.44

41.7

Associated Gene:

Gene:

TRPC3

Ensembl Gene ID:

ENSAPLG00000005541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005749

49976691 - 50016835

40145

ENSAPLT00000022084

49977295 - 50016835

39541