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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49998043_50007445_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49998043 - 50007445

Intron Length:

9403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCTG

5'SS Class:

major

3'SS Sequence:

CCTTCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTTTCTCTAACC

Flanking Amino Acid:

KLANIEKEFKNDYRKLSMQC

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

66.2

44.9

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

82.4

0.73

0.8

79.8

32.2

Minor 5ss

34.4

-1.8

3.4

47.3

48.1

Minor BPS

75.9

0.79

1.6

87.23

29.4

Associated Gene:

Gene:

TRPC3

Ensembl Gene ID:

ENSAPLG00000005541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005749

49976691 - 50016835

40145

ENSAPLT00000022084

49977295 - 50016835

39541