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Intron Name: Anas_platyrhynchos_platyrhynchos_4_50008218_50016584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50008218 - 50016584

Intron Length:

8367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATGTTGTGACCT

Flanking Amino Acid:

YYPPPPFASTMYIEESPSLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

41.9

Major BPS

100

1.24

0.5

100

Major PPT

67.3

0.39

0.8

66.6

28.1

Minor 5ss

34.5

-1.8

3.3

44.8

43.4

Minor BPS

44.7

-0.3

2.3

66.36

44.5

Associated Gene:

Gene:

TRPC3

Ensembl Gene ID:

ENSAPLG00000005541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022084

49977295 - 50016835

39541

ENSAPLT00000005749

49976691 - 50016835

40145