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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5005093_5005193_R

Intron Information:

Intron Rank:

136372

Intron Class:

major

Intron Phase:

Intron Coordinates:

5005093 - 5005193

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACATGC

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GGATTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

62.9

38.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

93.3

0.97

0.6

89.3

19.4

Minor 5ss

38.4

-1.3

50.9

45.7

Minor BPS

67.3

0.62

1.2

73.78

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036821

5005070 - 5006782

1713