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Intron Name: Anas_platyrhynchos_platyrhynchos_4_50109313_50110404_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50109313 - 50110404

Intron Length:

1092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGAC

5'SS Class:

strong_major

3'SS Sequence:

CATTTTAATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCATTTTAATC

Flanking Amino Acid:

MGCIMTEALENKSVHFPLRS

Intron Amino Acid Position:

679

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

29.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.1

0.47

0.9

63.7

41.6

Minor 5ss

32.3

-2

3.3

42.9

44.7

Minor BPS

60.2

0.3

1.3

62.79

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033962

50096523 - 50113846

17324