Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_50167426_50169601_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50167426 - 50169601

Intron Length:

2176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TTTCCTTTAAAG

Flanking Amino Acid:

KLELKETSAPGNVISLYFAF

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

76.8

0.67

0.9

75.9

Major PPT

81.3

0.71

0.9

82.5

26.6

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

70.8

0.52

1.4

74.3

37.5

Associated Gene:

Gene:

ADAD1

Ensembl Gene ID:

ENSAPLG00000006694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006952

50165616 - 50177202

11587