Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_50237637_50241359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50237637 - 50241359

Intron Length:

3723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGCCTG

5'SS Class:

major

3'SS Sequence:

TTCTTGCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCATTTTAAAA

Flanking Amino Acid:

ELLHTPENPVDECLFTAVTC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

61.4

44.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.1

0.54

0.8

69.1

31.6

Minor 5ss

36.2

-1.6

3.2

44.4

Minor BPS

61.3

0.35

1.4

68.54

37.9

Associated Gene:

Gene:

IL21

Ensembl Gene ID:

ENSAPLG00000006911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007179

50236922 - 50241656

4735