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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5024151_5046015_F

Intron Information:

Intron Rank:

143663

Intron Class:

major

Intron Phase:

Intron Coordinates:

5024151 - 5046015

Intron Length:

21865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

AATTAAGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

85.5

0.8

0.9

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

46.4

-0.1

2.3

70.03

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047788

5002177 - 5048697

46521

ENSAPLT00000020102

5021500 - 5048697

27198