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Intron Name: Anas_platyrhynchos_platyrhynchos_4_50372369_50374646_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

50372369 - 50374646

Intron Length:

2278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGATGC

5'SS Class:

major

3'SS Sequence:

TGGTTGTCCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

TTTGTGTGCATG

Flanking Amino Acid:

MKQAELFKSYGIPPPRGVLL

Intron Amino Acid Position:

611

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

59.9

40.2

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

59.9

0.22

1.1

59.4

Minor 5ss

44.9

-0.6

2.8

59.7

45.1

Minor BPS

-1

2.4

50.82

44.3

Associated Gene:

Gene:

SPATA5

Ensembl Gene ID:

ENSAPLG00000007122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007424

50364115 - 50553393

189279