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Intron Name: Anas_platyrhynchos_platyrhynchos_4_50408691_50421651_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50408691 - 50421651

Intron Length:

12961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCAATCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTCAATC

Flanking Amino Acid:

EIDALAVERGSSSGAGNVAD

Intron Amino Acid Position:

966

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.72

0.9

83.2

32.2

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

68.3

0.55

1.4

77.75

32.1

Associated Gene:

Gene:

SPATA5

Ensembl Gene ID:

ENSAPLG00000007122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007424

50364115 - 50553393

189279