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Intron Name: Anas_platyrhynchos_platyrhynchos_4_506265_507580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

506265 - 507580

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTATACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTTCTTTTATA

Flanking Amino Acid:

ALNTSNSTVVEEKKKKKKKK

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.6

0.85

0.8

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

62.1

0.37

1.6

68.85

38.5

Associated Gene:

Gene:

LARP7

Ensembl Gene ID:

ENSAPLG00000012887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013441

499617 - 522923

23307