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Intron Name: Anas_platyrhynchos_platyrhynchos_4_50844596_50853595_F

Intron Information:

Intron Rank:

140569

Intron Class:

major

Intron Phase:

Intron Coordinates:

50844596 - 50853595

Intron Length:

9000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTGCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TGGTTCCTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

74.6

0.55

0.8

72.4

32.3

Minor 5ss

39.7

-1.2

3.1

51.1

45.2

Minor BPS

49.3

-0

1.9

63.38

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026004

50742772 - 50854190

111419