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Intron Name: Anas_platyrhynchos_platyrhynchos_4_511138_511991_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

511138 - 511991

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAACCCTC

5'SS Class:

weak_major

3'SS Sequence:

TCAAATTGATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTCTTTTCAAAT

Flanking Amino Acid:

QKKPQSKNAKSTSEDSAPPV

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.4

0.32

1.3

44.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

60.4

0.24

1.1

58.9

45.6

Minor 5ss

51.5

0.05

2.8

36.5

Minor BPS

59.2

0.37

1.6

76.7

40.1

Associated Gene:

Gene:

LARP7

Ensembl Gene ID:

ENSAPLG00000012887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013441

499617 - 522923

23307