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Intron Name: Anas_platyrhynchos_platyrhynchos_4_51413945_51416511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51413945 - 51416511

Intron Length:

2567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGG

5'SS Class:

strong_major

3'SS Sequence:

TTATGCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTGTTTTGCACT

Flanking Amino Acid:

SFDIPEDTTPGSLVAAILAT

Intron Amino Acid Position:

1061

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.1

41.1

Major BPS

79.1

0.72

69.3

38.4

Major PPT

74.9

0.56

69.5

41.4

Minor 5ss

34.5

-1.8

2.8

42.5

44.3

Minor BPS

52.3

0.15

1.9

75.75

41.5

Associated Gene:

Gene:

FAT4

Ensembl Gene ID:

ENSAPLG00000007730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008042

51340259 - 51479965

139707