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Intron Name: Anas_platyrhynchos_platyrhynchos_4_514744_517171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

514744 - 517171

Intron Length:

2428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CTTGATTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

GTTAACTTGATT

Flanking Amino Acid:

KNNWKYEVLTGDNEQRYWQK

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

82.3

0.8

83.6

25.8

Major PPT

81.8

0.71

0.9

72.8

41.9

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

62.1

0.46

1.6

77.94

38.1

Associated Gene:

Gene:

LARP7

Ensembl Gene ID:

ENSAPLG00000012887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013441

499617 - 522923

23307