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Intron Name: Anas_platyrhynchos_platyrhynchos_4_51490722_51493221_R

Intron Information:

Intron Rank:

140013

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51490722 - 51493221

Intron Length:

2500

Sequence Information:

Terminal Dinucleotides:

GC-TT

5'SS Sequence:

GCA|GCAAACTCC

5'SS Class:

weak_major

3'SS Sequence:

TCCACTACACCTT|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

CCAATTTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.7

0.02

1.4

53.2

42.5

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

20.2

-1.7

4.1

40.4

37.9

Minor 5ss

36.3

-1.5

4.1

56.3

42.3

Minor BPS

44.8

-0.4

1.5

46.3

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022717

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019487

51489736 - 51493378

3643