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Intron Name: Anas_platyrhynchos_platyrhynchos_4_51605046_51608656_F

Intron Information:

Intron Rank:

136157

Intron Class:

major

Intron Phase:

Intron Coordinates:

51605046 - 51608656

Intron Length:

3611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGATCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTTTTCTGATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

76.5

0.6

0.9

73.7

35.9

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

57.9

0.23

1.8

70.59

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028137

51604480 - 51611662

7183