Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_51608718_51611415_F

Intron Information:

Intron Rank:

136159

Intron Class:

major

Intron Phase:

Intron Coordinates:

51608718 - 51611415

Intron Length:

2698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACATGG

5'SS Class:

major

3'SS Sequence:

ATTTTCTGATAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTGCAT

U12 Branch Point Sequence:

GCAGCCCTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

63.4

43.8

Major BPS

53.6

0.09

1.4

65.3

41.5

Major PPT

63.4

0.3

1.2

69.7

40.1

Minor 5ss

42.9

-0.8

2.9

56.6

47.5

Minor BPS

55.8

0.26

1.9

70.43

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033098

51608235 - 51611662

3428