Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_51752479_51755682_R

Intron Information:

Intron Rank:

131227

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51752479 - 51755682

Intron Length:

3204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCATA

5'SS Class:

major

3'SS Sequence:

CCCCTACCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTCCCCCTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

69.1

43.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

55.8

0.13

52.3

30.4

Minor 5ss

47.4

-0.3

2.9

66.4

44.6

Minor BPS

47.9

-0.1

60.5

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038118

51752355 - 51758518

6164