Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_51755796_51756094_R

Intron Information:

Intron Rank:

131228

Intron Class:

major

Intron Phase:

Intron Coordinates:

51755796 - 51756094

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

ATTCCTTTGAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTTCCCTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

76.1

34.8

Major BPS

78.8

0.71

67.6

40.6

Major PPT

64.7

0.33

1.2

67.1

37.8

Minor 5ss

35.9

-1.6

2.9

43.1

43.9

Minor BPS

77.6

0.95

1.5

93.68

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038118

51752355 - 51758518

6164