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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5208196_5208728_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5208196 - 5208728

Intron Length:

533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

AAATATATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TGTCTCAAAAAA

Flanking Amino Acid:

RGDTGFPGPRGPPGQKGDQG

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

38.6

Major BPS

75.9

0.64

66.1

40.5

Major PPT

67.8

0.4

1.1

59.2

44.9

Minor 5ss

37.4

-1.4

44.5

Minor BPS

45.3

-0.3

1.9

59.75

39.4

Associated Gene:

Gene:

COL25A1

Ensembl Gene ID:

ENSAPLG00000008681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009056

5201163 - 5301226

100064