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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5212630_5222579_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5212630 - 5222579

Intron Length:

9950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGCTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TCTAACATACCT

Flanking Amino Acid:

PGLPGLPGIKGEPGFIGPQG

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

0.47

1.1

70.7

39.1

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

47.3

-0.1

2.1

70.76

45.5

Associated Gene:

Gene:

COL25A1

Ensembl Gene ID:

ENSAPLG00000008681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009056

5201163 - 5301226

100064