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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5231935_5234019_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5231935 - 5234019

Intron Length:

2085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTAATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGTTTTAATT

Flanking Amino Acid:

KGDPGERGEKGDAGENGPKG

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.9

0.61

0.9

70.8

38.9

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

68.4

0.66

1.3

79.54

37.3

Associated Gene:

Gene:

COL25A1

Ensembl Gene ID:

ENSAPLG00000008681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009056

5201163 - 5301226

100064