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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52330817_52332195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52330817 - 52332195

Intron Length:

1379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACAGA

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

ATGTCTTTCACA

Flanking Amino Acid:

RAIGNAAKSQIVTNVKNTLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

71.3

40.5

Major BPS

68.7

0.47

0.9

67.9

Major PPT

78.1

0.63

0.9

72.5

37.1

Minor 5ss

38.1

-1.3

49.1

46.7

Minor BPS

64.3

0.44

1.7

73.21

39.1

Associated Gene:

Gene:

HSPA4L

Ensembl Gene ID:

ENSAPLG00000008176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008587

52326755 - 52350461

23707