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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52334160_52335354_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52334160 - 52335354

Intron Length:

1195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TTCTTGGAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TATGTCATAATA

Flanking Amino Acid:

KKPVADCVISVPSFFTDAER

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

72.9

39.3

Major BPS

76.9

0.67

66.3

40.4

Major PPT

66.2

0.37

1.1

42.6

Minor 5ss

44.1

-0.6

2.9

63.9

41.5

Minor BPS

57.1

0.22

1.7

68.9

37.6

Associated Gene:

Gene:

HSPA4L

Ensembl Gene ID:

ENSAPLG00000008176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008587

52326755 - 52350461

23707