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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52338651_52338760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52338651 - 52338760

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCATGG

5'SS Class:

major

3'SS Sequence:

CCTATTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

CGTCTTGTAACA

Flanking Amino Acid:

NDLDVSSKMNRAQFEQLCAA

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.2

54.5

45.4

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

79.4

0.66

0.8

73.1

31.6

Minor 5ss

41.8

-0.9

3.2

56.7

47.4

Minor BPS

48.4

-0.1

60.49

39.9

Associated Gene:

Gene:

HSPA4L

Ensembl Gene ID:

ENSAPLG00000008176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008587

52326755 - 52350461

23707