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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52340182_52340712_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52340182 - 52340712

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGATA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ATGTAATAAAAT

Flanking Amino Acid:

EAVARGCALQCAILSPAFKV

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

80.5

33.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

0.76

0.8

76.9

37.3

Minor 5ss

41.9

-0.9

3.1

56.7

47.6

Minor BPS

45.4

-0.2

2.1

66.1

43.8

Associated Gene:

Gene:

HSPA4L

Ensembl Gene ID:

ENSAPLG00000008176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008587

52326755 - 52350461

23707