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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52342748_52344860_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52342748 - 52344860

Intron Length:

2113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

SKNQGRDDELDKMQVDQDEG

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

77.7

31.7

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

41.3

-1

2.5

47.2

43.7

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

HSPA4L

Ensembl Gene ID:

ENSAPLG00000008176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008587

52326755 - 52350461

23707