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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52344963_52345492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52344963 - 52345492

Intron Length:

530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTTTGTATT

5'SS Class:

major

3'SS Sequence:

GTAAATCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TGTTCCTTAAAG

Flanking Amino Acid:

ETENAGNETKVASGDKQDNP

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.2

78.4

35.4

Major BPS

82.2

0.8

71.9

35.8

Major PPT

70.3

0.46

61.7

Minor 5ss

45.8

-0.4

2.5

61.8

36.4

Minor BPS

77.8

0.73

1.4

77.97

38.4

Associated Gene:

Gene:

HSPA4L

Ensembl Gene ID:

ENSAPLG00000008176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008587

52326755 - 52350461

23707