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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52345631_52346548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52345631 - 52346548

Intron Length:

918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTATCTGCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGAGTTTTAACT

Flanking Amino Acid:

DLINCYIENEGKMMMQDKLE

Intron Amino Acid Position:

608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.7

0.44

0.9

62.5

39.5

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

66.6

0.6

1.4

76.8

39.9

Associated Gene:

Gene:

HSPA4L

Ensembl Gene ID:

ENSAPLG00000008176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008587

52326755 - 52350461

23707