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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52346675_52347822_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52346675 - 52347822

Intron Length:

1148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

ACTTGCTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GTGTCTGTAACT

Flanking Amino Acid:

GVFEKFITEEDTNKLTLMLE

Intron Amino Acid Position:

650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.4

26.9

Major BPS

62.2

0.3

1.2

38.7

Major PPT

71.2

0.48

0.9

65.1

35.7

Minor 5ss

45.6

-0.5

3.1

65.7

39.5

Minor BPS

62.2

0.46

80.25

Associated Gene:

Gene:

HSPA4L

Ensembl Gene ID:

ENSAPLG00000008176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008587

52326755 - 52350461

23707