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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52349127_52349679_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52349127 - 52349679

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAAGCA

5'SS Class:

major

3'SS Sequence:

TCTCTCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

CATGTGCTAATT

Flanking Amino Acid:

MKAVEAYKNKDEKYDHLDPA

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

62.1

36.8

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

78.2

0.63

0.7

77.3

24.7

Minor 5ss

28.7

-2.4

3.6

46.3

Minor BPS

42.8

-0.4

2.3

60.62

43.7

Associated Gene:

Gene:

HSPA4L

Ensembl Gene ID:

ENSAPLG00000008176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008587

52326755 - 52350461

23707