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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52380716_52381097_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52380716 - 52381097

Intron Length:

382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

GTAAACACAATT

Flanking Amino Acid:

VLRISCDGNVIAVYHPNEGR

Intron Amino Acid Position:

694

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

73.3

37.3

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

83.4

0.75

0.7

79.8

25.6

Minor 5ss

32.6

-2

3.3

45.3

43.7

Minor BPS

43.9

-0.3

1.9

61.5

41.5

Associated Gene:

Gene:

PLK4

Ensembl Gene ID:

ENSAPLG00000009390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009839

52372117 - 52386996

14880