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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52389829_52390184_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
52389829 - 52390184

Intron Length:
356

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTT|GTGAGCCAA

5'SS Class:
major

3'SS Sequence:
GCTTTTCCAGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGTAT

U12 Branch Point Sequence:
GCTTTTGTATTC

Flanking Amino Acid:
SGARILGPVFQRKDMKKLNQ

Intron Amino Acid Position:
464

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.2
0.34
1.1
55.9
38.6

Major BPS
71.5
0.53
1.4
71.7
44.6

Major PPT
75
0.56
0.9
70.8
34.7

Minor 5ss
34.3
-1.8
3.1
44.3
44.6

Minor BPS
43.9
-0.4
2.1
53.39
39.5

Associated Gene:

Gene:
MFSD8

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

52388940 - 52396984
8045