Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_52394444_52394736_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52394444 - 52394736

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCACG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTTACAGGAACA

Flanking Amino Acid:

TARALVGFGAGNVAVVRSYI

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.2

66.3

45.2

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

85.2

0.79

0.9

90.8

21.8

Minor 5ss

45.2

-0.5

2.6

58.6

45.7

Minor BPS

47.4

-0.2

2.3

70.67

40.9

Associated Gene:

Gene:

MFSD8

Ensembl Gene ID:

ENSAPLG00000009632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031166

52388940 - 52396984

8045

ENSAPLT00000010042

52375913 - 52396984

21072

ENSAPLT00000035787

52388940 - 52396984

8045