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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52456414_52458692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52456414 - 52458692

Intron Length:

2279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTAGCT

5'SS Class:

major

3'SS Sequence:

TGTTCTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTCAAACCT

Flanking Amino Acid:

SL*MMQKNTTGTDWNACFDF

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

65.5

38.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

83.4

0.75

0.7

81.7

30.3

Minor 5ss

32.1

-2

3.6

48.9

46.8

Minor BPS

49.7

0.06

2.2

80.09

42.1

Associated Gene:

Gene:

LARP1B

Ensembl Gene ID:

ENSAPLG00000010129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010571

52444335 - 52460228

15894