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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5245658_5248468_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5245658 - 5248468

Intron Length:

2811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAGTAT

5'SS Class:

major

3'SS Sequence:

TGTTTCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATTTGCTAAACG

Flanking Amino Acid:

TGPQGPPGQKGSVGVPGVPG

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

70.7

35.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.56

0.9

67.9

38.9

Minor 5ss

43.8

-0.7

3.3

63.6

48.1

Minor BPS

57.5

0.1

2.2

69.5

43.9

Associated Gene:

Gene:

COL25A1

Ensembl Gene ID:

ENSAPLG00000008681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009056

5201163 - 5301226

100064