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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5248496_5258664_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5248496 - 5258664

Intron Length:

10169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTCCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

ATTATGTTAATT

Flanking Amino Acid:

PGKTGEQGLTGPQGPPGQKG

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

89.5

0.89

0.6

84.5

23.1

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

57.8

0.32

2.1

78.47

38.2

Associated Gene:

Gene:

COL25A1

Ensembl Gene ID:

ENSAPLG00000008681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009056

5201163 - 5301226

100064