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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5261816_5262700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5261816 - 5262700

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGCTT

5'SS Class:

major

3'SS Sequence:

TCTGCTGGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGATGATGATTT

Flanking Amino Acid:

QQLIKRRLIKGDQGQAGPPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

66.2

44.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

67.3

0.39

65.3

41.1

Minor 5ss

35.4

-1.7

3.8

55.9

48.3

Minor BPS

41.3

-0.5

2.2

59.89

43.3

Associated Gene:

Gene:

COL25A1

Ensembl Gene ID:

ENSAPLG00000008681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009056

5201163 - 5301226

100064