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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5262773_5274010_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5262773 - 5274010

Intron Length:

11238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

CCTGCCTGATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TGATCTTCAACT

Flanking Amino Acid:

KGDQGDQGPRMVFPKINHGF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.2

39.9

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

63.7

0.31

62.1

38.6

Minor 5ss

43.5

-0.7

2.9

52.9

44.1

Minor BPS

69.5

0.69

1.5

82.23

38.8

Associated Gene:

Gene:

COL25A1

Ensembl Gene ID:

ENSAPLG00000008681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009056

5201163 - 5301226

100064