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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52652247_52654618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52652247 - 52654618

Intron Length:

2372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCCAC

5'SS Class:

major

3'SS Sequence:

TGATGCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ATTCCTTTAAAA

Flanking Amino Acid:

FTHLRQDLERVRNLTYMVTR

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

1.1

63.2

43.4

Major BPS

73.1

0.58

79.6

29.1

Major PPT

68.8

0.42

0.9

59.1

42.7

Minor 5ss

37.7

-1.4

42.7

44.4

Minor BPS

70.6

0.64

1.3

76.83

33.2

Associated Gene:

Gene:

JADE1

Ensembl Gene ID:

ENSAPLG00000015188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015840

52621583 - 52657279

35697