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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52661747_52665449_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52661747 - 52665449

Intron Length:

3703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAAAC

5'SS Class:

major

3'SS Sequence:

TTCTTAATTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTGTTCTTAATT

Flanking Amino Acid:

EQRAATASQKLSVITSQKKK

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

68.6

36.4

Major BPS

0.92

0.9

86.2

29.1

Major PPT

83.5

0.75

0.8

77.5

34.5

Minor 5ss

32.1

-2

3.2

42.9

44.3

Minor BPS

83.4

1.13

91.18

32.6

Associated Gene:

Gene:

SCLT1

Ensembl Gene ID:

ENSAPLG00000014774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015418

52661684 - 52702271

40588

ENSAPLT00000029968

52661684 - 52700883

39200

ENSAPLT00000017888

52661552 - 52702271

40720