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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52696505_52696870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52696505 - 52696870

Intron Length:

366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTTTGCTTAACT

Flanking Amino Acid:

KSEQVTKENERLHAELKEVL

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.3

34.3

Major BPS

74.6

0.61

1.4

34.5

Major PPT

78.6

0.64

0.9

74.6

Minor 5ss

34.4

-1.8

2.8

41.5

45.1

Minor BPS

84.1

1.15

1.6

100

28.8

Associated Gene:

Gene:

SCLT1

Ensembl Gene ID:

ENSAPLG00000014774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029968

52661684 - 52700883

39200

ENSAPLT00000017888

52661552 - 52702271

40720

ENSAPLT00000015418

52661684 - 52702271

40588