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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52699847_52700645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52699847 - 52700645

Intron Length:

799

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

GATCTTCTAACT

Flanking Amino Acid:

EPLQCISRITDQRLNVAFEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.9

82.8

36.4

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

86.8

0.83

0.8

84.8

35.4

Minor 5ss

24.8

-2.9

3.8

39.4

46.1

Minor BPS

54.8

0.23

1.7

72.01

38.4

Associated Gene:

Gene:

SCLT1

Ensembl Gene ID:

ENSAPLG00000014774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015418

52661684 - 52702271

40588

ENSAPLT00000029968

52661684 - 52700883

39200