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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52702492_52704654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

52702492 - 52704654

Intron Length:

2163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTGTCTTATGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

81.6

0.71

0.9

77.5

35.8

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

52.8

0.07

69.18

42.9

Associated Gene:

Gene:

C4orf33

Ensembl Gene ID:

ENSAPLG00000014754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015371

52702292 - 52708741

6450